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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs11698653 chr20:44365484 C/T WFDC3 chr20:44376583-44420571:- 0.84 6.07 1.47E-7 Box Plot
ACC rs11699222 chr20:44389828 G/A WFDC3 chr20:44376583-44420571:- 0.89 6.2 9.45E-8 Box Plot
ACC rs116995488 chr13:28679920 A/T GTF3A chr13:27998681-28009960:+ 0.75 5.8 3.94E-7 Box Plot
ACC rs117011437 chr7:76336756 C/T POMZP3 chr7:76239303-76256578:- 1.1 5.83 3.57E-7 Box Plot
ACC rs11706586 chr3:133394930 G/A NPHP3 chr3:132399453-132441286:- 0.39 5.08 5.16E-6 Box Plot
ACC rs11714392 chr3:133395366 A/T NPHP3 chr3:132399453-132441286:- 0.39 5.08 5.16E-6 Box Plot
ACC rs11718490 chr3:46628763 C/T TDGF1 chr3:46616024-46623953:+ 0.75 6.5 3.05E-8 Box Plot
ACC rs11720497 chr3:135881890 T/A PPP2R3A chr3:135684515-135866733:+ 0.84 5.15 4.1E-6 Box Plot
ACC rs1173417 chr6:86403941 C/T SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs1173418 chr6:86402916 G/A SNHG5 chr6:86370668-86388454:- 0.72 8.07 9.9E-11 Box Plot
ACC rs11752251 chr6:86162868 G/A SNHG5 chr6:86370668-86388454:- 0.63 6.46 3.59E-8 Box Plot
ACC rs11752795 chr6:86287129 C/A SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs11758508 chr6:86506878 A/G SNHG5 chr6:86370668-86388454:- 0.77 5.39 1.73E-6 Box Plot
ACC rs11760504 chr7:64487555 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs11760779 chr7:76033906 T/C UPK3B chr7:76139745-76145838:+ 0.72 5.35 2.03E-6 Box Plot